miRNA: all
CLIP-Data >= 1
Degradome-Data >= 0
target: CDR1as

The miRNA-circRNA Interactions Supported by Ago CLIP-seq Data

Download: EXCEL TXT
BindID miRNAID miRNA MatchGeneID MatchGeneName GeneType TargetSite Start End strand Alignment align targetSeq Class AgoExpNum CleaveExpNum AGOStats AGOclipNum lineID
BindID miRNAID miRNA MatchGeneID MatchGeneName GeneType TargetSite Start End strand Alignment align targetSeq Class AgoExpNum CleaveExpNum AGOStats AGOclipNum lineID

Description:

Here, we presented the miRNA-target interactions by intersecting the predicting target sites of miRNAs with binding sites of Ago protein, which were derived from CLIP-seq data.

The interactions of miRNA-circRNA were predicted by using miRanda program.

Usage:

Select the miRNA: all
Select the target: CDR1as
Refine results with high stringency of CLIP Data: 3
Users can filter the results by searching in the table. The searchable columns are allowed using comparison operators like ">=", "<=", ">", "<" and "=". The ">=" is set by default.