miRNA: all
CLIP-Data >= 1
Degradome-Data >= 0
pan-Cancer >= 0
target: SCARNA11

The miRNA-sncRNA Interactions Supported by Ago CLIP-seq Data

Download: EXCEL TXT
BindID miRNAID miRNA GeneID GeneName GeneType TargetSite Start End strand Alignment align targetSeq Class AgoExpNum CleaveExpNum AGOStats AGOclipNum Pan-Cancer lineID
BindID miRNAID miRNA GeneID GeneName GeneType TargetSite Start End strand Alignment align targetSeq Class AgoExpNum CleaveExpNum AGOStats AGOclipNum Pan-Cancer lineID

Description:

Here, we presented the miRNA-target interactions by intersecting the predicting target sites of miRNAs with binding sites of Ago protein, which were derived from CLIP-seq data.

The interactions of miRNA-sncRNA were predicted by using miRanda program.

Usage:

Select the miRNA: all
Select the target: SCARNA11
Refine results with high stringency of CLIP Data: 3
Explore the interaction of miRNA-sncRNA with Pan-Cancer analysis: 5
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