View the predicted miRNA-lncRNA interactions by scanning lncRNA sequences overlapping with CLIP-Seq peaks for potential microRNA targets (miRanda/mirSVR) and then output the detailed information. Here, we list predicted miRNA-target interactions overlapped with CLIP-Seq data.
You can input the Gene Symbol: HOTAIR
You can also select a microRNA gene: hsa-let-7a-5p
If you do not input/select anything, you can browse all miRNA-lncRNA interactions.
- Number of supporting Experiments can be used to reduce false positives for predicted target sites. For example, medium stringency(>=2) means that >=2 CLIP-Seq experiments supported the predicted miRNA target site.
- Number of Cancer Types(Pan-Cancer) can be used to explore anti-correlation (pearson correlation: r<0, p-value<0.05) between miRNA and target genes across diverse cancer types. For example, cancer type >=1 means that expression of miRNA and target gene is anti-correlation (pearson correlation: r<0, p-value<0.05) at least one cancer type.